EnhancerDB
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  3. rs2948179[chr3:58046081]
Enhancers that have rs2948179[chr3:58046081]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2948179[chr3:58046081]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58046067 58046088 IRF1 JASPAR yes 2671122
chr3 58046069 58046090 IRF1 JASPAR yes 2671123
chr3 58046071 58046092 IRF1 JASPAR yes 2671125
chr3 58046073 58046094 IRF1 JASPAR yes 2671126
chr3 58046074 58046089 FOXP1 JASPAR yes 2671127
chr3 58046074 58046095 IRF1 JASPAR yes 2671128
chr3 58046075 58046090 STAT2 JASPAR yes 2671129
chr3 58046075 58046096 IRF1 JASPAR yes 2671130
chr3 58046076 58046091 FOXP1 JASPAR yes 2671131
chr3 58046076 58046097 IRF1 JASPAR yes 2671132
chr3 58046077 58046098 IRF1 JASPAR yes 2671133
chr3 58046078 58046093 FOXP1 JASPAR yes 2671134
chr3 58046078 58046099 IRF1 JASPAR yes 2671135
chr3 58046079 58046094 FOXP1 JASPAR yes 2671136
chr3 58046080 58046095 FOXP1 JASPAR yes 2671137
chr3 58046081 58046096 FOXP1 JASPAR yes 2671138
Genes associated with rs2948179[chr3:58046081], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More