EnhancerDB
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  3. rs2952589[chr2:227511971]
Enhancers that have rs2952589[chr2:227511971]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227505953 227529050 enh19283
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2952589[chr2:227511971]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227511965 227511975 CLOCK JASPAR yes 81478164
chr2 227511965 227511975 HEY1 JASPAR yes 81478165
chr2 227511965 227511975 HEY2 JASPAR yes 81478166
chr2 227511965 227511975 MNT JASPAR yes 81478167
chr2 227511966 227511973 USF1 JASPAR yes 81478168
chr2 227511966 227511976 MAX JASPAR yes 81478169
chr2 227511967 227511972 MYC TRANSFAC yes 81478170
chr2 227511967 227511972 USF1 TRANSFAC yes 81478171
chr2 227511967 227511972 USF2 TRANSFAC yes 81478172
Genes associated with rs2952589[chr2:227511971], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More