EnhancerDB
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  3. rs2965812[chr16:89522747]
Enhancers that have rs2965812[chr16:89522747]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89499432 89527658 enh16907
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2965812[chr16:89522747]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89522731 89522750 CTCF JASPAR yes 12346892
chr16 89522738 89522751 NR2F1 JASPAR yes 12346895
chr16 89522739 89522747 CREB1 JASPAR yes 12346896
chr16 89522740 89522758 RARA JASPAR yes 12346897
Genes associated with rs2965812[chr16:89522747], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 89642176 89663654 + CPNE7 ENSG00000178773.10 89642176 119429 Spleen 0.037275 15179