EnhancerDB
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  3. rs2965946[chr16:89516612]
Enhancers that have rs2965946[chr16:89516612]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89499432 89527658 enh16907
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2965946[chr16:89516612]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89516594 89516614 RREB1 JASPAR yes 12345957
chr16 89516604 89516625 REST JASPAR yes 12345958
chr16 89516605 89516624 REST JASPAR yes 12345959
Genes associated with rs2965946[chr16:89516612], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More