EnhancerDB
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  3. rs2965947[chr16:89518670]
Enhancers that have rs2965947[chr16:89518670]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89499432 89527658 enh16907
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2965947[chr16:89518670]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89518659 89518674 MEF2C JASPAR yes 12346273
chr16 89518660 89518675 MEF2A JASPAR yes 12346274
chr16 89518661 89518673 MEF2A JASPAR yes 12346275
chr16 89518661 89518673 MEF2D JASPAR yes 12346276
chr16 89518664 89518676 IRF1 JASPAR yes 12346277
chr16 89518665 89518686 IRF1 JASPAR yes 12346278
chr16 89518667 89518681 IRF7 JASPAR yes 12346279
Genes associated with rs2965947[chr16:89518670], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More