EnhancerDB
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  3. rs2971987[chr1:41867980]
Enhancers that have rs2971987[chr1:41867980]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2971987[chr1:41867980]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41867960 41867981 IRF1 JASPAR yes 28385681
chr1 41867978 41867992 ONECUT2 JASPAR yes 28385682
chr1 41867978 41867992 ONECUT3 JASPAR yes 28385683
Genes associated with rs2971987[chr1:41867980], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More