EnhancerDB
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  3. rs2988399[chr1:10586801]
Enhancers that have rs2988399[chr1:10586801]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10562245 10593475 enh59
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2988399[chr1:10586801]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10586786 10586802 SOX4 JASPAR yes 26721551
chr1 10586795 10586801 SOX10 JASPAR yes 26721555
chr1 10586800 10586813 NR2F1 JASPAR yes 26721556
Genes associated with rs2988399[chr1:10586801], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More