EnhancerDB
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  3. rs2988734[chr1:229356873]
Enhancers that have rs2988734[chr1:229356873]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs2988734[chr1:229356873]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229356713 229357369 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107877937
chr1 229356796 229357336 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107877938
chr1 229356799 229357183 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390752
chr1 229356805 229357421 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21390753
chr1 229356805 229357421 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877939
chr1 229356818 229357148 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390754
chr1 229356855 229357199 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390755
chr1 229356858 229357703 TCF7L2 UCSC Txn Factor no Conserved 107877940
chr1 229356860 229356873 DUXA JASPAR yes 35976129
chr1 229356863 229357359 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21390756
chr1 229356863 229357359 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107877941
chr1 229356868 229357652 TCF12 UCSC Txn Factor no Conserved 107877942
chr1 229356869 229357405 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107877943
chr1 229356870 229357250 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21390757
chr1 229356871 229357147 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21390758
Genes associated with rs2988734[chr1:229356873], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More