EnhancerDB
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  3. rs2997334[chr1:41863323]
Enhancers that have rs2997334[chr1:41863323]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2997334[chr1:41863323]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41863307 41863328 IRF1 JASPAR yes 28385040
chr1 41863311 41863325 SPIC JASPAR yes 28385041
chr1 41863311 41863326 PRDM1 JASPAR yes 28385042
chr1 41863311 41863326 STAT2 JASPAR yes 28385043
chr1 41863311 41863329 IRF2 JASPAR yes 28385044
chr1 41863319 41863330 FOXA1 JASPAR yes 28385045
chr1 41863319 41863334 FOXA1 JASPAR yes 28385046
Genes associated with rs2997334[chr1:41863323], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More