EnhancerDB
  1. Home
  2. SNP
  3. rs2997338[chr1:41872078]
Enhancers that have rs2997338[chr1:41872078]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2997338[chr1:41872078]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41872073 41872086 NFKB1 JASPAR yes 28386169
chr1 41872073 41872086 NFKB2 JASPAR yes 28386170
chr1 41872074 41872084 NFKB1 JASPAR yes 28386171
chr1 41872074 41872084 RELA JASPAR yes 28386172
chr1 41872074 41872084 REL JASPAR yes 28386173
chr1 41872074 41872085 NFKB1 JASPAR yes 28386174
chr1 41872075 41872086 NFKB1 JASPAR yes 28386175
Genes associated with rs2997338[chr1:41872078], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More