EnhancerDB
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  3. rs3007685[chr1:151898037]
Enhancers that have rs3007685[chr1:151898037]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151885865 151921875 enh624
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs3007685[chr1:151898037]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151897602 151899108 ZNF143 GTRD no Epithelial (MCF-7) 21338080
chr1 151897625 151898636 ZNF143 GTRD no Epithelial (MCF-7) 21338081
chr1 151897711 151899086 ZNF143 GTRD no Epithelial (MCF-7) 21338082
chr1 151897753 151898137 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21338083
chr1 151897794 151898271 ZNF274 GTRD no Bone Marrow (K562) 21338084
chr1 151897805 151898069 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21338085
chr1 151897837 151898936 ZNF274 GTRD no Bone Marrow (K562) 21338086
chr1 151897926 151898572 ZNF274 GTRD no Bone Marrow (K562) 21338087
chr1 151898030 151898039 NKX2-8 JASPAR yes 32203177
chr1 151898030 151898040 NKX2-3 JASPAR yes 32203178
chr1 151898031 151898039 ISL2 JASPAR yes 32203179
chr1 151898031 151898040 NKX3-2 JASPAR yes 32203180
Genes associated with rs3007685[chr1:151898037], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More