EnhancerDB
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  3. rs3009935[chr1:218663189]
Enhancers that have rs3009935[chr1:218663189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218644305 218676855 enh12672
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs3009935[chr1:218663189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218663187 218663199 FOXC2 JASPAR yes 35386348
chr1 218663188 218663199 FOXB1 JASPAR yes 35386349
chr1 218663188 218663199 FOXC1 JASPAR yes 35386350
chr1 218663189 218663193 YY1 TRANSFAC yes 35386351
Genes associated with rs3009935[chr1:218663189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 218519577 218617961 + TGFB2 ENSG00000092969.7 218519577 45228 Thyroid 2.81216e-11 1849