EnhancerDB
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  3. rs3052406[chr17:65475556]
Enhancers that have rs3052406[chr17:65475556]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
chr17 65475284 65475682 vista25645
VISTA
Transcript factors that have rs3052406[chr17:65475556]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65475541 65475556 HNF1A JASPAR yes 21279904
chr17 65475541 65475556 HNF1A JASPAR yes 55509506
Genes associated with rs3052406[chr17:65475556], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More