EnhancerDB
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  3. rs3052411[chr17:65473357]
Enhancers that have rs3052411[chr17:65473357]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs3052411[chr17:65473357]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65471728 65473681 TEF1 GTRD no Bone (Osteoblast) 21782278
chr17 65471728 65473681 TEF1 GTRD no Bone (Osteoblast) 108285951
chr17 65473351 65473372 IRF1 JASPAR yes 55509193
chr17 65473352 65473373 IRF1 JASPAR yes 55509194
chr17 65473353 65473374 IRF1 JASPAR yes 55509195
chr17 65473354 65473369 FOXP1 JASPAR yes 55509196
chr17 65473354 65473375 IRF1 JASPAR yes 55509197
chr17 65473355 65473376 IRF1 JASPAR yes 55509198
chr17 65473356 65473371 FOXP1 JASPAR yes 55509199
chr17 65473356 65473377 IRF1 JASPAR yes 55509200
chr17 65473357 65473372 FOXP1 JASPAR yes 55509201
chr17 65473357 65473378 IRF1 JASPAR yes 55509202
Genes associated with rs3052411[chr17:65473357], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More