EnhancerDB
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  3. rs3059889[chr6:30808032]
Enhancers that have rs3059889[chr6:30808032]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3059889[chr6:30808032]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30808021 30808036 FOXP1 JASPAR yes 101057908
chr6 30808030 30808034 H1TF2 TRANSFAC yes 101057909
chr6 30808030 30808034 NFE TRANSFAC yes 101057910
chr6 30808030 30808034 SRF TRANSFAC yes 101057911
chr6 30808030 30808040 HOXA13 JASPAR yes 101057912
chr6 30808030 30808040 HOXB13 JASPAR yes 101057913
chr6 30808030 30808040 HOXD13 JASPAR yes 101057914
chr6 30808031 30808043 FOXI1 JASPAR yes 101057915
chr6 30808032 30808046 ONECUT2 JASPAR yes 101057916
chr6 30808032 30808046 ONECUT3 JASPAR yes 101057917
chr6 30808032 30808047 FOXP1 JASPAR yes 101057918
chr6 30808032 30808047 HNF1A JASPAR yes 101057919
Genes associated with rs3059889[chr6:30808032], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 31686425 31689622 - LY6G6C ENSG00000204421.2 31689622 878393 Liver 0.233567 6399