EnhancerDB
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  3. rs3122053[chr1:25094233]
Enhancers that have rs3122053[chr1:25094233]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs3122053[chr1:25094233]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25094214 25094235 IRF1 JASPAR yes 27529128
chr1 25094228 25094234 TCF4 TRANSFAC yes 27529130
Genes associated with rs3122053[chr1:25094233], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More