EnhancerDB
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  3. rs3127475[chr1:244491928]
Enhancers that have rs3127475[chr1:244491928]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 244477784 244495570 enh12850
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Thyroid Uterus Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs3127475[chr1:244491928]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 244491921 244491931 HOXA13 JASPAR yes 36728310
chr1 244491921 244491931 HOXB13 JASPAR yes 36728311
chr1 244491921 244491931 HOXD13 JASPAR yes 36728312
chr1 244491921 244491932 HOXA10 JASPAR yes 36728313
chr1 244491922 244491931 CDX1 JASPAR yes 36728314
chr1 244491922 244491933 CDX2 JASPAR yes 36728315
chr1 244491927 244491933 NFIC JASPAR yes 36728316
chr1 244491928 244491944 SOX4 JASPAR yes 36728317
Genes associated with rs3127475[chr1:244491928], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More