EnhancerDB
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  3. rs3129977[chr6:30745800]
Enhancers that have rs3129977[chr6:30745800]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3129977[chr6:30745800]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30745784 30745805 IRF1 JASPAR yes 101048044
chr6 30745785 30745800 MEF2A JASPAR yes 101048045
chr6 30745788 30745803 FOXP1 JASPAR yes 101048051
chr6 30745789 30745810 IRF1 JASPAR yes 101048052
chr6 30745790 30745805 FOXP1 JASPAR yes 101048053
chr6 30745792 30745807 FOXP1 JASPAR yes 101048054
chr6 30745794 30745800 TBP TRANSFAC yes 101048055
chr6 30745794 30745809 FOXP1 JASPAR yes 101048056
chr6 30745794 30745815 IRF1 JASPAR yes 101048057
chr6 30745796 30745808 FOXC2 JASPAR yes 101048058
chr6 30745796 30745816 RREB1 JASPAR yes 101048059
chr6 30745797 30745808 FOXP2 JASPAR yes 101048060
chr6 30745798 30745813 STAT2 JASPAR yes 101048061
chr6 30745799 30745811 IRF1 JASPAR yes 101048062
chr6 30745799 30745814 FOXP1 JASPAR yes 101048063
chr6 30745799 30745820 IRF1 JASPAR yes 101048064
Genes associated with rs3129977[chr6:30745800], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More