EnhancerDB
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  3. rs3129980[chr6:30758371]
Enhancers that have rs3129980[chr6:30758371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3129980[chr6:30758371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30758369 30758377 TBX5 JASPAR yes 101050153
chr6 30758369 30758378 ZEB1 JASPAR yes 101050154
chr6 30758369 30758382 ZBTB18 JASPAR yes 101050155
chr6 30758370 30758380 FIGLA JASPAR yes 101050156
chr6 30758370 30758380 ID4 JASPAR yes 101050157
chr6 30758370 30758380 TCF3 JASPAR yes 101050158
chr6 30758370 30758380 TCF4 JASPAR yes 101050159
Genes associated with rs3129980[chr6:30758371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More