EnhancerDB
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  3. rs3130017[chr6:33342431]
Enhancers that have rs3130017[chr6:33342431]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33338553 33346195 enh59610
Bone Marrow (K562) Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Liver Thyroid Uterus Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs3130017[chr6:33342431]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33342419 33342440 IRF1 JASPAR yes 101146871
chr6 33342421 33342436 FOXP1 JASPAR yes 101146872
chr6 33342422 33342437 FOXP1 JASPAR yes 101146873
chr6 33342423 33342438 FOXP1 JASPAR yes 101146874
chr6 33342424 33342439 FOXP1 JASPAR yes 101146875
chr6 33342424 33342444 RREB1 JASPAR yes 101146876
chr6 33342424 33342445 IRF1 JASPAR yes 101146877
chr6 33342426 33342441 FOXP1 JASPAR yes 101146878
chr6 33342429 33342449 RREB1 JASPAR yes 101146879
chr6 33342430 33342451 IRF1 JASPAR yes 101146880
chr6 33342431 33342437 TCF4 TRANSFAC yes 101146881
chr6 33342431 33342446 FOXP1 JASPAR yes 101146882
Genes associated with rs3130017[chr6:33342431], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More