EnhancerDB
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  3. rs3215960[chr1:33453011]
Enhancers that have rs3215960[chr1:33453011]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33442929 33472683 enh216
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
Transcript factors that have rs3215960[chr1:33453011]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33453001 33453014 NFKB1 JASPAR yes 28019599
chr1 33453001 33453014 NFKB2 JASPAR yes 28019600
chr1 33453007 33453017 FIGLA JASPAR yes 28019601
chr1 33453009 33453014 USF2 TRANSFAC yes 28019602
Genes associated with rs3215960[chr1:33453011], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More