EnhancerDB
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  3. rs322198[chr17:25684920]
Enhancers that have rs322198[chr17:25684920]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25656275 25685575 enh4305
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs322198[chr17:25684920]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25684916 25684931 FOXP1 JASPAR yes 53624238
chr17 25684916 25684937 IRF1 JASPAR yes 53624239
chr17 25684920 25684935 STAT2 JASPAR yes 53624240
Genes associated with rs322198[chr17:25684920], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More