EnhancerDB
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  3. rs322199[chr17:25685052]
Enhancers that have rs322199[chr17:25685052]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25656275 25685575 enh4305
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs322199[chr17:25685052]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25685047 25685062 SCRT1 JASPAR yes 53624300
chr17 25685049 25685062 SCRT2 JASPAR yes 53624301
chr17 25685051 25685057 PTF TRANSFAC yes 53624302
Genes associated with rs322199[chr17:25685052], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More