EnhancerDB
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  3. rs33993189[chr12:66004413]
Enhancers that have rs33993189[chr12:66004413]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65985125 66011195 enh47591
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr12 66004084 66004433 vista13822
VISTA
Transcript factors that have rs33993189[chr12:66004413]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 66003961 66004670 ZNF274 GTRD no Blood (GM12878) 108042143
chr12 66003978 66004454 ZNF274 GTRD no Blood (GM12878) 108042144
chr12 66004292 66004696 TCF7L2 GTRD no Colon (HCT116) 21553173
chr12 66004292 66004696 TCF7L2 GTRD no Colon (HCT116) 108042147
chr12 66004407 66004428 IRF1 JASPAR yes 82423850
chr12 66004407 66004428 IRF1 JASPAR yes 121475566
chr12 66004409 66004424 PRDM1 JASPAR yes 82423851
chr12 66004409 66004424 STAT2 JASPAR yes 82423852
chr12 66004409 66004424 PRDM1 JASPAR yes 121475567
chr12 66004409 66004424 STAT2 JASPAR yes 121475568
chr12 66004410 66004431 IRF1 JASPAR yes 82423853
chr12 66004410 66004431 IRF1 JASPAR yes 121475569
chr12 66004411 66004432 IRF1 JASPAR yes 82423854
chr12 66004411 66004432 IRF1 JASPAR yes 121475570
chr12 66004412 66004427 FOXP1 JASPAR yes 82423855
chr12 66004412 66004427 FOXP1 JASPAR yes 121475571
chr12 66004413 66004428 FOXP1 JASPAR yes 82423856
chr12 66004413 66004428 FOXP1 JASPAR yes 121475572
Genes associated with rs33993189[chr12:66004413], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More