EnhancerDB
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  3. rs34001726[chr17:41497016]
Enhancers that have rs34001726[chr17:41497016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41479046 41498765 enh17167
Brain (SK-N-MC) Astrocyte Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs34001726[chr17:41497016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41496245 41497572 ZNF274 GTRD no Cervix (HeLa-S3) 21760201
chr17 41496379 41498209 ZNF274 GTRD no Cervix (HeLa-S3) 21760214
chr17 41496447 41497288 ZNF274 GTRD no Liver (HepG2) 21760216
chr17 41496500 41497315 ZNF274 GTRD no Cervix (HeLa-S3) 21760217
chr17 41496528 41497362 ZNF274 GTRD no Liver (HepG2) 21760218
chr17 41496547 41497340 ZNF274 GTRD no Liver (HepG2) 21760219
chr17 41496552 41497538 ZNF274 GTRD no Liver (HepG2) 21760220
chr17 41496616 41497251 ZNF274 GTRD no Liver (HepG2) 21760221
chr17 41496654 41497380 ZNF274 GTRD no Cervix (HeLa-S3) 21760222
chr17 41496664 41497312 ZNF274 GTRD no Liver (HepG2) 21760223
chr17 41496664 41497431 ZNF274 GTRD no Cervix (HeLa-S3) 21760224
chr17 41496666 41497330 ZNF274 GTRD no Liver (HepG2) 21760225
chr17 41496673 41497268 ZNF274 GTRD no Cervix (HeLa-S3) 21760226
chr17 41496676 41497205 ZBTB33 GTRD no Brain (SK-N-SH) 21760227
chr17 41496689 41497240 ZNF274 GTRD no Cervix (HeLa-S3) 21760228
chr17 41496689 41497389 ZNF274 GTRD no Cervix (HeLa-S3) 21760229
chr17 41496691 41497281 ZNF274 GTRD no Liver (HepG2) 21760230
chr17 41496696 41497104 SOX2 GTRD no Neural Stem Cells (H9) 21760231
chr17 41496708 41497087 SOX2 GTRD no Neural Stem Cells (H9) 21760232
chr17 41496710 41497640 ZNF274 GTRD no Liver (HepG2) 21760233
chr17 41496711 41497184 ZBTB33 GTRD no Brain (SK-N-SH) 21760234
chr17 41496722 41497126 MYOD GTRD no Muscle (Myoblast) 21760235
chr17 41496728 41497224 ZNF274 GTRD no Cervix (HeLa-S3) 21760236
chr17 41496729 41497451 ZNF274 GTRD no Cervix (HeLa-S3) 21760237
chr17 41496730 41497154 SOX2 GTRD no Neural Stem Cells (H9) 21760238
chr17 41496777 41497181 ZNF274 GTRD no Liver (HepG2) 21760239
chr17 41496789 41497305 ZNF274 GTRD no Liver (HepG2) 21760240
chr17 41496790 41497040 SOX2 GTRD no Neural Stem Cells (H9) 21760241
chr17 41496808 41497204 ZNF274 GTRD no Liver (HepG2) 21760242
chr17 41497009 41497023 TLX1 JASPAR yes 54344845
Genes associated with rs34001726[chr17:41497016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More