EnhancerDB
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  3. rs34124425[chr17:773498]
Enhancers that have rs34124425[chr17:773498]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 769365 796155 enh4193
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs34124425[chr17:773498]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 773270 774381 ZNF274 GTRD no Blood (GM12878) 108227815
chr17 773342 774481 ZNF274 GTRD no Blood (GM12878) 108227816
chr17 773366 774278 ZNF274 GTRD no Blood (GM12878) 108227817
chr17 773366 774396 ZNF274 GTRD no Blood (GM12878) 108227818
chr17 773393 774380 ZNF274 GTRD no Blood (GM12878) 108227819
chr17 773393 774456 ZNF274 GTRD no Blood (GM12878) 108227820
chr17 773449 773833 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108227821
chr17 773462 773955 ZNF274 GTRD no Blood (GM12878) 108227822
chr17 773463 774479 TCF7L2 GTRD no Colon (HCT116) 21739044
chr17 773463 774479 TCF7L2 GTRD no Colon (HCT116) 108227823
chr17 773473 773763 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21739045
chr17 773473 773763 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108227824
chr17 773479 773498 PAX5 JASPAR yes 52634507
chr17 773487 774228 ZNF274 GTRD no Blood (GM12878) 108227825
chr17 773492 774331 ZNF274 GTRD no Blood (GM12878) 108227826
chr17 773493 774156 ZNF274 GTRD no Blood (GM12878) 108227827
chr17 773498 773504 ZNF354C JASPAR yes 52634510
chr17 773498 773508 GSC2 JASPAR yes 52634511
chr17 773498 773508 GSC JASPAR yes 52634512
Genes associated with rs34124425[chr17:773498], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More