EnhancerDB
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  3. rs34138277[chr1:19788951]
Enhancers that have rs34138277[chr1:19788951]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34138277[chr1:19788951]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19788948 19788963 FOXP1 JASPAR yes 27193787
chr1 19788949 19788964 FOXP1 JASPAR yes 27193788
chr1 19788950 19788965 FOXP1 JASPAR yes 27193789
chr1 19788950 19788971 IRF1 JASPAR yes 27193790
chr1 19788951 19788966 FOXP1 JASPAR yes 27193791
Genes associated with rs34138277[chr1:19788951], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More