EnhancerDB
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  3. rs34152023[chr16:85263738]
Enhancers that have rs34152023[chr16:85263738]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34152023[chr16:85263738]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85263566 85263810 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21721700
chr16 85263615 85264967 TCF7L2 GTRD no Colon (HCT116) 21721701
chr16 85263615 85264967 TCF7L2 GTRD no Colon (HCT116) 108213541
chr16 85263651 85265556 ZNF143 GTRD no Epithelial (MCF-7) 21721702
chr16 85263651 85265556 ZNF143 GTRD no Epithelial (MCF-7) 108213542
chr16 85263672 85265121 TCF7L2 GTRD no Colon (HCT116) 21721703
chr16 85263672 85265121 TCF7L2 GTRD no Colon (HCT116) 108213543
chr16 85263723 85263744 REST JASPAR yes 12035794
chr16 85263729 85263738 NKX3-2 JASPAR yes 12035795
chr16 85263734 85265114 TCF7L2 GTRD no Colon (HCT116) 21721704
chr16 85263734 85265114 TCF7L2 GTRD no Colon (HCT116) 108213544
Genes associated with rs34152023[chr16:85263738], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More