EnhancerDB
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  3. rs34154598[chr6:30779083]
Enhancers that have rs34154598[chr6:30779083]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34154598[chr6:30779083]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30779078 30779088 SP1 JASPAR yes 101053471
chr6 30779079 30779089 SP1 JASPAR yes 101053472
chr6 30779080 30779085 SP1 TRANSFAC yes 101053473
chr6 30779081 30779086 SP1 TRANSFAC yes 101053474
chr6 30779081 30779087 SP1 TRANSFAC yes 101053475
Genes associated with rs34154598[chr6:30779083], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More