EnhancerDB
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  3. rs34209530[chr6:44040343]
Enhancers that have rs34209530[chr6:44040343]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34209530[chr6:44040343]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44039982 44042697 POLR2A UCSC Txn Factor no Conserved 108540407
chr6 44040342 44040352 ZNF740 JASPAR yes 101820652
chr6 44040343 44040353 SP1 JASPAR yes 101820653
chr6 44040343 44040353 ZNF740 JASPAR yes 101820654
chr6 44040343 44040363 RREB1 JASPAR yes 101820655
Genes associated with rs34209530[chr6:44040343], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More