EnhancerDB
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  3. rs34224477[chr1:19753103]
Enhancers that have rs34224477[chr1:19753103]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34224477[chr1:19753103]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19753094 19753109 TFAP2A JASPAR yes 27188667
chr1 19753095 19753110 TFAP2A JASPAR yes 27188668
chr1 19753095 19753110 TFAP2C JASPAR yes 27188669
chr1 19753097 19753109 TFAP2A JASPAR yes 27188671
chr1 19753097 19753109 TFAP2B JASPAR yes 27188672
chr1 19753097 19753109 TFAP2C JASPAR yes 27188673
chr1 19753097 19753112 TFAP2A JASPAR yes 27188674
chr1 19753097 19753112 TFAP2C JASPAR yes 27188675
chr1 19753099 19753108 TFAP2A JASPAR yes 27188676
Genes associated with rs34224477[chr1:19753103], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More