EnhancerDB
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  3. rs342818[chr1:229367115]
Enhancers that have rs342818[chr1:229367115]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs342818[chr1:229367115]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229366971 229367481 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390865
chr1 229367021 229367617 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21390866
chr1 229367075 229367725 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390867
chr1 229367092 229367622 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390868
chr1 229367114 229367119 GATA2 JASPAR yes 35977785
chr1 229367115 229367499 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390869
Genes associated with rs342818[chr1:229367115], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More