EnhancerDB
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  3. rs342820[chr1:229365476]
Enhancers that have rs342820[chr1:229365476]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs342820[chr1:229365476]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229364845 229365947 POLR2A UCSC Txn Factor no Conserved 107877985
chr1 229365192 229365736 ZNF263 UCSC Txn Factor no Conserved 107877986
chr1 229365242 229365732 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877987
chr1 229365302 229365758 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390845
chr1 229365302 229365758 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877988
chr1 229365329 229365979 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390846
chr1 229365329 229365979 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877989
chr1 229365358 229365874 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390847
chr1 229365358 229365874 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877990
chr1 229365367 229365871 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390848
chr1 229365367 229365871 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877991
chr1 229365438 229365958 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877992
Genes associated with rs342820[chr1:229365476], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More