EnhancerDB
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Enhancers that have rs34349553[chr4:148686489]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 148667325 148718095 enh37177
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs34349553[chr4:148686489]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 148686469 148686489 RREB1 JASPAR yes 93519095
chr4 148686471 148686491 RREB1 JASPAR yes 93519096
chr4 148686472 148686492 RREB1 JASPAR yes 93519097
chr4 148686473 148686493 RREB1 JASPAR yes 93519098
chr4 148686475 148686495 RREB1 JASPAR yes 93519099
chr4 148686477 148686497 RREB1 JASPAR yes 93519100
chr4 148686478 148686498 RREB1 JASPAR yes 93519101
chr4 148686479 148686499 RREB1 JASPAR yes 93519102
chr4 148686480 148686494 PLAG1 JASPAR yes 93519103
chr4 148686480 148686500 RREB1 JASPAR yes 93519104
chr4 148686481 148686501 RREB1 JASPAR yes 93519105
chr4 148686482 148686502 RREB1 JASPAR yes 93519106
chr4 148686484 148686494 ZNF740 JASPAR yes 93519107
chr4 148686486 148686496 SP1 JASPAR yes 93519108
chr4 148686486 148686496 ZNF740 JASPAR yes 93519109
chr4 148686486 148686506 RREB1 JASPAR yes 93519110
chr4 148686487 148686497 SP1 JASPAR yes 93519111
chr4 148686487 148686497 ZNF740 JASPAR yes 93519112
chr4 148686487 148686507 RREB1 JASPAR yes 93519113
chr4 148686488 148686498 SP1 JASPAR yes 93519114
chr4 148686488 148686498 ZNF740 JASPAR yes 93519115
chr4 148686489 148686499 SP1 JASPAR yes 93519116
chr4 148686489 148686499 ZNF740 JASPAR yes 93519117
chr4 148686489 148686509 RREB1 JASPAR yes 93519118
Genes associated with rs34349553[chr4:148686489], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More