EnhancerDB
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  3. rs34412534[chr1:235102220]
Enhancers that have rs34412534[chr1:235102220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34412534[chr1:235102220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235101701 235102446 MYOD GTRD no Muscle (Myoblast) 21401771
chr1 235102219 235102234 LEF1 JASPAR yes 36335764
chr1 235102220 235102234 TCF7L2 JASPAR yes 36335765
Genes associated with rs34412534[chr1:235102220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More