EnhancerDB
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  3. rs34437961[chr5:172278203]
Enhancers that have rs34437961[chr5:172278203]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34437961[chr5:172278203]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172278200 172278215 FOXP1 JASPAR yes 67834675
chr5 172278201 172278216 FOXP1 JASPAR yes 67834676
chr5 172278202 172278217 FOXP1 JASPAR yes 67834677
chr5 172278202 172278223 IRF1 JASPAR yes 67834678
chr5 172278203 172278218 FOXP1 JASPAR yes 67834679
chr5 172278203 172278224 IRF1 JASPAR yes 67834680
Genes associated with rs34437961[chr5:172278203], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More