EnhancerDB
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  3. rs34468962[chr2:232557457]
Enhancers that have rs34468962[chr2:232557457]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34468962[chr2:232557457]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232557442 232557463 IRF1 JASPAR yes 81737416
chr2 232557446 232557461 STAT2 JASPAR yes 81737417
chr2 232557453 232557465 IRF1 JASPAR yes 81737418
Genes associated with rs34468962[chr2:232557457], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More