EnhancerDB
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  3. rs34477585[chr1:43406265]
Enhancers that have rs34477585[chr1:43406265]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43394865 43408895 enh296
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
chr1 43406108 43407009 vista1386
VISTA
Transcript factors that have rs34477585[chr1:43406265]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43406253 43406268 LEF1 JASPAR yes 28468737
chr1 43406253 43406268 LEF1 JASPAR yes 118281734
chr1 43406259 43406280 IRF1 JASPAR yes 28468738
chr1 43406259 43406280 IRF1 JASPAR yes 118281735
chr1 43406261 43406276 PRDM1 JASPAR yes 28468739
chr1 43406261 43406276 PRDM1 JASPAR yes 118281736
chr1 43406263 43406275 IRF1 JASPAR yes 28468740
chr1 43406263 43406275 IRF1 JASPAR yes 118281737
chr1 43406265 43406286 IRF1 JASPAR yes 28468741
chr1 43406265 43406286 IRF1 JASPAR yes 118281738
Genes associated with rs34477585[chr1:43406265], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More