EnhancerDB
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  3. rs34479050[chr2:187404858]
Enhancers that have rs34479050[chr2:187404858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 187403805 187413855 enh19063
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Uterus Thyroid Pancreas (Panc1) Lung (PC-9) Muscle (Myoblast) Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs34479050[chr2:187404858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 187404840 187404861 IRF1 JASPAR yes 79474827
chr2 187404841 187404862 IRF1 JASPAR yes 79474829
chr2 187404842 187404863 IRF1 JASPAR yes 79474831
chr2 187404844 187404859 STAT2 JASPAR yes 79474832
chr2 187404845 187404859 STAT1 JASPAR yes 79474833
chr2 187404846 187404860 IRF7 JASPAR yes 79474834
chr2 187404846 187404867 IRF1 JASPAR yes 79474835
chr2 187404847 187404862 FOXP1 JASPAR yes 79474836
chr2 187404847 187404868 IRF1 JASPAR yes 79474837
chr2 187404848 187404863 PRDM1 JASPAR yes 79474838
chr2 187404848 187404869 IRF1 JASPAR yes 79474839
chr2 187404852 187404873 IRF1 JASPAR yes 79474840
chr2 187404853 187404868 FOXP1 JASPAR yes 79474841
chr2 187404853 187404874 IRF1 JASPAR yes 79474842
chr2 187404854 187404875 IRF1 JASPAR yes 79474843
chr2 187404855 187404870 FOXP1 JASPAR yes 79474844
chr2 187404855 187404876 IRF1 JASPAR yes 79474845
chr2 187404857 187404872 FOXP1 JASPAR yes 79474846
chr2 187404858 187404873 FOXP1 JASPAR yes 79474847
Genes associated with rs34479050[chr2:187404858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More