EnhancerDB
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  3. rs34499649[chr2:232548969]
Enhancers that have rs34499649[chr2:232548969]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34499649[chr2:232548969]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232548962 232548975 NFKB1 JASPAR yes 81736304
chr2 232548963 232548974 NFKB1 JASPAR yes 81736305
chr2 232548964 232548974 NFKB1 JASPAR yes 81736306
chr2 232548964 232548974 RELA JASPAR yes 81736307
chr2 232548964 232548975 NFKB1 JASPAR yes 81736308
chr2 232548967 232548977 ZNF740 JASPAR yes 81736309
chr2 232548968 232548978 SP1 JASPAR yes 81736310
chr2 232548968 232548978 ZNF740 JASPAR yes 81736311
chr2 232548969 232548979 SP1 JASPAR yes 81736312
chr2 232548969 232548979 ZNF740 JASPAR yes 81736313
chr2 232548969 232548990 ZNF263 JASPAR yes 81736314
Genes associated with rs34499649[chr2:232548969], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More