EnhancerDB
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  3. rs34580017[chr1:8440400]
Enhancers that have rs34580017[chr1:8440400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8427225 8493496 enh42
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34580017[chr1:8440400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8440386 8440401 FOXA1 JASPAR yes 26545739
chr1 8440389 8440404 SCRT1 JASPAR yes 26545740
chr1 8440394 8440415 IRF1 JASPAR yes 26545741
chr1 8440399 8440414 FOXP1 JASPAR yes 26545742
chr1 8440400 8440415 FOXP1 JASPAR yes 26545743
Genes associated with rs34580017[chr1:8440400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More