EnhancerDB
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  3. rs34598075[chr19:4373103]
Enhancers that have rs34598075[chr19:4373103]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4365204 4379535 enh4970
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34598075[chr19:4373103]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4372618 4375651 TCF7L2 GTRD no Colon (HCT116) 21840936
chr19 4372618 4375651 TCF7L2 GTRD no Colon (HCT116) 108371001
chr19 4372618 4375651 TCF7L2 GTRD no Colon (HCT116) 108371002
chr19 4372944 4378227 TCF7L2 GTRD no Colon (HCT116) 21840937
chr19 4372944 4378227 TCF7L2 GTRD no Colon (HCT116) 108371003
chr19 4372944 4378227 TCF7L2 GTRD no Colon (HCT116) 108371004
chr19 4372944 4378227 TCF7L2 GTRD no Colon (HCT116) 108371005
chr19 4373087 4377145 ZNF274 GTRD no Bone Marrow (K562) 21840938
chr19 4373087 4377145 ZNF274 GTRD no Bone Marrow (K562) 108371006
chr19 4373087 4377145 ZNF274 GTRD no Bone Marrow (K562) 108371007
chr19 4373087 4377145 ZNF274 GTRD no Bone Marrow (K562) 108371008
chr19 4373088 4373109 ZNF263 JASPAR yes 112169478
chr19 4373089 4376698 ZNF274 GTRD no Blood (GM12878) 21840939
chr19 4373089 4376698 ZNF274 GTRD no Blood (GM12878) 108371009
chr19 4373089 4376698 ZNF274 GTRD no Blood (GM12878) 108371010
chr19 4373089 4376698 ZNF274 GTRD no Blood (GM12878) 108371011
chr19 4373092 4373106 PLAG1 JASPAR yes 112169479
chr19 4373092 4373113 ZNF263 JASPAR yes 112169480
chr19 4373093 4373112 CTCF JASPAR yes 112169481
chr19 4373099 4373109 MZF1 JASPAR yes 112169482
chr19 4373099 4373120 ZNF263 JASPAR yes 112169483
chr19 4373102 4373112 SP1 JASPAR yes 112169484
Genes associated with rs34598075[chr19:4373103], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More