EnhancerDB
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  3. rs34602299[chr6:43994112]
Enhancers that have rs34602299[chr6:43994112]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34602299[chr6:43994112]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43994097 43994112 HNF1A JASPAR yes 101814275
chr6 43994102 43994121 PAX5 JASPAR yes 101814277
chr6 43994110 43994130 RREB1 JASPAR yes 101814278
chr6 43994111 43994121 SP1 JASPAR yes 101814279
Genes associated with rs34602299[chr6:43994112], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 44187242 44201888 + SLC29A1 ENSG00000112759.12 44187242 193130 Adrenal 0.145522 6630