EnhancerDB
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  3. rs34617778[chr12:65042971]
Enhancers that have rs34617778[chr12:65042971]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34617778[chr12:65042971]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65042965 65042986 IRF1 JASPAR yes 121420671
chr12 65042966 65042987 IRF1 JASPAR yes 121420672
chr12 65042967 65042982 STAT2 JASPAR yes 121420673
chr12 65042967 65042988 IRF1 JASPAR yes 121420674
chr12 65042971 65042986 FOXP1 JASPAR yes 121420675
chr12 65042971 65042992 IRF1 JASPAR yes 121420676
Genes associated with rs34617778[chr12:65042971], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More