EnhancerDB
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  3. rs34619704[chr17:2797417]
Enhancers that have rs34619704[chr17:2797417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs34619704[chr17:2797417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2795210 2800120 ZNF143 GTRD no Epithelial (MCF-7) 21739739
chr17 2795210 2800120 ZNF143 GTRD no Epithelial (MCF-7) 108231314
chr17 2795895 2799236 TCF7L2 GTRD no Colon (HCT116) 21739754
chr17 2795895 2799236 TCF7L2 GTRD no Colon (HCT116) 108231342
chr17 2797402 2797417 MEF2C JASPAR yes 52783533
chr17 2797403 2797418 MEF2A JASPAR yes 52783534
chr17 2797411 2797426 FOXP1 JASPAR yes 52783538
chr17 2797411 2797432 IRF1 JASPAR yes 52783539
chr17 2797413 2797428 FOXP1 JASPAR yes 52783540
chr17 2797414 2797429 FOXP1 JASPAR yes 52783541
chr17 2797414 2797435 IRF1 JASPAR yes 52783542
chr17 2797415 2797430 FOXP1 JASPAR yes 52783543
Genes associated with rs34619704[chr17:2797417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More