EnhancerDB
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  3. rs34675197[chr6:16729433]
Enhancers that have rs34675197[chr6:16729433]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16667585 16734115 enh23080
Liver Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 16729304 16729629 vista51174
VISTA
Transcript factors that have rs34675197[chr6:16729433]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16729332 16729733 TCF7L2 UCSC Txn Factor no Conserved 108538913
chr6 16729422 16729437 HNF4A JASPAR yes 70327087
chr6 16729422 16729437 HNF4A JASPAR yes 100334120
chr6 16729423 16729437 NR2F1 JASPAR yes 70327088
chr6 16729423 16729437 RXRB JASPAR yes 70327089
chr6 16729423 16729437 RXRG JASPAR yes 70327090
chr6 16729423 16729437 NR2F1 JASPAR yes 100334121
chr6 16729423 16729437 RXRB JASPAR yes 100334122
chr6 16729423 16729437 RXRG JASPAR yes 100334123
chr6 16729423 16729438 HNF4G JASPAR yes 70327091
chr6 16729423 16729438 HNF4G JASPAR yes 100334124
chr6 16729432 16729453 ZNF263 JASPAR yes 70327092
chr6 16729432 16729453 ZNF263 JASPAR yes 100334125
Genes associated with rs34675197[chr6:16729433], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More