EnhancerDB
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  3. rs34783939[chr1:230288206]
Enhancers that have rs34783939[chr1:230288206]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34783939[chr1:230288206]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230287538 230289779 ZNF274 GTRD no Bone Marrow (K562) 21391558
chr1 230287538 230289779 ZNF274 GTRD no Bone Marrow (K562) 107878789
chr1 230288190 230288206 POU4F3 JASPAR yes 36027176
chr1 230288192 230288206 POU4F1 JASPAR yes 36027177
chr1 230288192 230288207 HNF1A JASPAR yes 36027178
chr1 230288193 230288206 HNF1B JASPAR yes 36027179
chr1 230288193 230288207 POU4F1 JASPAR yes 36027180
chr1 230288193 230288209 POU4F2 JASPAR yes 36027181
chr1 230288193 230288209 POU4F3 JASPAR yes 36027182
chr1 230288196 230288206 GSX2 JASPAR yes 36027183
chr1 230288196 230288206 HOXB2 JASPAR yes 36027184
chr1 230288196 230288206 HOXB3 JASPAR yes 36027185
chr1 230288196 230288206 MNX1 JASPAR yes 36027186
chr1 230288196 230288206 POU6F1 JASPAR yes 36027187
chr1 230288196 230288207 HOXA10 JASPAR yes 36027188
chr1 230288198 230288209 PHOX2A JASPAR yes 36027197
Genes associated with rs34783939[chr1:230288206], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More