EnhancerDB
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  3. rs34800232[chr5:173206186]
Enhancers that have rs34800232[chr5:173206186]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34800232[chr5:173206186]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173206178 173206199 IRF1 JASPAR yes 67904026
chr5 173206182 173206186 YY1 TRANSFAC yes 67904028
chr5 173206182 173206196 IRF7 JASPAR yes 67904029
chr5 173206182 173206197 IRF9 JASPAR yes 67904030
chr5 173206183 173206201 IRF2 JASPAR yes 67904031
chr5 173206183 173206204 ZNF263 JASPAR yes 67904032
chr5 173206184 173206205 IRF1 JASPAR yes 67904033
chr5 173206186 173206201 PRDM1 JASPAR yes 67904034
chr5 173206186 173206201 STAT2 JASPAR yes 67904035
Genes associated with rs34800232[chr5:173206186], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More