EnhancerDB
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  3. rs34829942[chr6:30778013]
Enhancers that have rs34829942[chr6:30778013]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34829942[chr6:30778013]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30778010 30778025 FOXP1 JASPAR yes 101053311
chr6 30778011 30778026 FOXP1 JASPAR yes 101053312
chr6 30778012 30778027 FOXP1 JASPAR yes 101053313
chr6 30778012 30778033 IRF1 JASPAR yes 101053314
chr6 30778013 30778028 FOXP1 JASPAR yes 101053315
Genes associated with rs34829942[chr6:30778013], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More