EnhancerDB
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  3. rs34859978[chr3:58057830]
Enhancers that have rs34859978[chr3:58057830]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34859978[chr3:58057830]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58057809 58057830 IRF1 JASPAR yes 2672788
chr3 58057813 58057834 IRF1 JASPAR yes 2672789
chr3 58057814 58057835 IRF1 JASPAR yes 2672791
chr3 58057818 58057832 STAT1 JASPAR yes 2672792
chr3 58057818 58057833 STAT2 JASPAR yes 2672793
chr3 58057819 58057834 FOXP1 JASPAR yes 2672794
chr3 58057819 58057840 IRF1 JASPAR yes 2672795
chr3 58057820 58057831 FOXA1 JASPAR yes 2672796
chr3 58057821 58057832 FOXC1 JASPAR yes 2672797
chr3 58057821 58057833 FOXC2 JASPAR yes 2672798
chr3 58057821 58057836 IRF9 JASPAR yes 2672799
chr3 58057822 58057833 FOXP2 JASPAR yes 2672800
chr3 58057822 58057836 IRF7 JASPAR yes 2672801
chr3 58057823 58057837 STAT1 JASPAR yes 2672802
chr3 58057823 58057838 STAT2 JASPAR yes 2672803
chr3 58057824 58057833 SRY JASPAR yes 2672804
chr3 58057824 58057836 IRF1 JASPAR yes 2672805
chr3 58057826 58057846 RREB1 JASPAR yes 2672806
chr3 58057829 58057844 FOXP1 JASPAR yes 2672807
Genes associated with rs34859978[chr3:58057830], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More